Package: MetabolAnalyze 1.3.1

MetabolAnalyze: Probabilistic Latent Variable Models for Metabolomic Data

Fits probabilistic principal components analysis, probabilistic principal components and covariates analysis and mixtures of probabilistic principal components models to metabolomic spectral data.

Authors:Nyamundanda Gift, Isobel Claire Gormley and Lorraine Brennan.

MetabolAnalyze_1.3.1.tar.gz
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MetabolAnalyze_1.3.1.tgz(r-4.4-any)MetabolAnalyze_1.3.1.tgz(r-4.3-any)
MetabolAnalyze_1.3.1.tar.gz(r-4.5-noble)MetabolAnalyze_1.3.1.tar.gz(r-4.4-noble)
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MetabolAnalyze.pdf |MetabolAnalyze.html✨
MetabolAnalyze/json (API)

# Install 'MetabolAnalyze' in R:
install.packages('MetabolAnalyze', repos = c('https://gormleyi.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • BrainSpectra - NMR spectral data from brain tissue samples.
  • UrineSpectra - NMR metabolomic spectra from urine samples of 18 mice.

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.69 score 1 stars 1 packages 18 scripts 320 downloads 9 mentions 19 exports 8 dependencies

Last updated 5 years agofrom:dc21350206. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 01 2024
R-4.5-winOKNov 01 2024
R-4.5-linuxOKNov 01 2024
R-4.4-winOKNov 01 2024
R-4.4-macOKNov 01 2024
R-4.3-winOKNov 01 2024
R-4.3-macOKNov 01 2024

Exports:Aitkenestep1estep2htloadings.jack.plotloadings.plotmppca.loadings.plotmppca.metabolmppca.scores.plotmstep1mstep2ppca.metabolppca.metabol.jackppca.scores.plotppcca.metabolppcca.metabol.jackppcca.scores.plotscalingstandardize

Dependencies:bitopscaToolsellipsegplotsgtoolsKernSmoothmclustmvtnorm